Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915373.1_cds_XP_016465218.1_58191
CDS Infomation

[gene=LOC107788080] [db_xref=GeneID:107788080] [protein=aspartic proteinase-like protein 1 isoform X3] [protein_id=XP_016465218.1] [location=complement(join(45560..45816,46728..46799,46958..47018,47341..47440,47525..47595,47669..47807,47943..48170,48300..48541,50607..50745,50864..50943))] [gbkey=CDS]
Sequence

ATGTTAAAAAAGAAAACATGGTTACGGGTTCATCAAATGAAGGTTTCAGTGTGCGTGAAT
TGCAATTTTTGGCCCATAAGGTTACATTACATGTATATTGATATAGGAACCCCATCTGTT
TCTTTTCTCATCGCACTGGATGCTGGAAGTGACTTGCTTTGGGTTCCATGTGAATGTGTA
CAATGCGCTCCTCTATCAGCCAGTTACTATAGCAGCCTGGATAAAGATCTAAACGAGTAC
AATCCATCCGGCTCAAGCACAAGTAAGTTCCTGTCATGCAGCCATCAGTTATGCGAACTG
GGTTCAAATTGCAAAACCCCTAAGCAGCCTTGCCCATACACTGTGAACTATGTGTCAGAT
GATACATCCACATCTGGAGTGCTCGTGGAAGATATCTTGCACCTTGCATCAGGCAGCCGT
ATGGCAGCCAACAGCTCTGCTAGAGCTCCAGTCATTTTCGGATGTGGTAGTAAGCAAACT
GGTGGTTACCTAAATGGAGTTGCACCTGATGGTCTTTTGGGTTTGGGACCTGGAGAAATT
TCAGTTCCTAGTCGTCTTGCAAAAGCTGGTTTAGTCCAAAACTCCTTTTCTCTTTGTTTT
AAGGAAGATGATTCAGGAAGGATTTTCTTTGGAGACCAAGGGCCTGCTAGCCAGCAGAAA
ACTTCCTTCTTGCCTTCAGATGGACAATTTGTTACTTATGTTGTTGGGGTGGAATCATGT
TGTGTTGGGAGCTCCTGTATTGAACAGACAAACTTCAAAGCCATTGTGGATAGCGGGACA
TCCTTTACATTTCTCCCAGATCAAATTTACGATAGAGTCGTTAAAGAGTTTGACAGGGAA
GTGAATGCTTCAAAAGCTAGCTTTGAAGGATATCCTTGGCAATATTGCTACAAATCCAGT
TCTGAAGGGTTACCAAAGATTCCTTCATTTACTCTGAAGTTCATGACGAACAGCACTTTT
ATAGTCCAGGATCCTGTATTTGTGATTTATGGCAGTCAGGGTGCTGTTGGATTTTGTTTA
GCTGTGGAGCCTTCGGGCATAGATATCGGAACGATTGGACAGAACTTCATGACGGGATAT
CGGATGGTGTTTGATAGAGAAAACCTGAAACTGGGTTGGTCACTCTCTGACTGTCAAGAC
CTTACTGATAGTAATAGACTGCCAATGACTCCAGCGAATGGTAGTTCACCAAACTCACTG
CCAACAGACCAGCAGAATTCCCCTAATAGCTCCGGAGTTGCACCTGCTGTTGCTGGAAGG
ACACCCTCGAAATCTGCTGCACCAACTAATCGTCGAATCTCATTCAAGTTATGTTTAACG
AAGTTGCTGTTTCCATTGCTTCTCGTGTCAAGTAACTTCCGACAATCCATGTATACATTG
ACCTTATAA

Peptide Sequence

PEP ID

XP_016465218.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 1 isoform X3 [Nicotiana tabacum]
Sequence

MLKKKTWLRVHQMKVSVCVNCNFWPIRLHYMYIDIGTPSVSFLIALDAGSDLLWVPCECV
QCAPLSASYYSSLDKDLNEYNPSGSSTSKFLSCSHQLCELGSNCKTPKQPCPYTVNYVSD
DTSTSGVLVEDILHLASGSRMAANSSARAPVIFGCGSKQTGGYLNGVAPDGLLGLGPGEI
SVPSRLAKAGLVQNSFSLCFKEDDSGRIFFGDQGPASQQKTSFLPSDGQFVTYVVGVESC
CVGSSCIEQTNFKAIVDSGTSFTFLPDQIYDRVVKEFDREVNASKASFEGYPWQYCYKSS
SEGLPKIPSFTLKFMTNSTFIVQDPVFVIYGSQGAVGFCLAVEPSGIDIGTIGQNFMTGY
RMVFDRENLKLGWSLSDCQDLTDSNRLPMTPANGSSPNSLPTDQQNSPNSSGVAPAVAGR
TPSKSAAPTNRRISFKLCLTKLLFPLLLVSSNFRQSMYTLTL

Transcript Sequence

Gene sequence data has not been registered.